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» Protein Classification with Multiple Algorithms
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BMCBI
2010
133views more  BMCBI 2010»
14 years 9 months ago
Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
Lance E. Palmer, Mathäus Dejori, Randall A. B...
KDD
2009
ACM
191views Data Mining» more  KDD 2009»
15 years 10 months ago
Efficient methods for topic model inference on streaming document collections
Topic models provide a powerful tool for analyzing large text collections by representing high dimensional data in a low dimensional subspace. Fitting a topic model given a set of...
Limin Yao, David M. Mimno, Andrew McCallum
KDD
2004
ACM
163views Data Mining» more  KDD 2004»
15 years 10 months ago
Exploiting dictionaries in named entity extraction: combining semi-Markov extraction processes and data integration methods
We consider the problem of improving named entity recognition (NER) systems by using external dictionaries--more specifically, the problem of extending state-of-the-art NER system...
William W. Cohen, Sunita Sarawagi
DAGSTUHL
2010
14 years 11 months ago
CSG Operations of Arbitrary Primitives with Interval Arithmetic and Real-Time Ray Casting
We apply Knoll et al.'s algorithm [9] to interactively ray-cast constructive solid geometry (CSG) objects of arbitrary primitives represented as implicit functions. Whereas m...
Younis Hijazi, Aaron Knoll, Mathias Schott, Andrew...
BMCBI
2008
108views more  BMCBI 2008»
14 years 9 months ago
Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene express
Background: The identification of specific gene expression signature for distinguishing sample groups is a dominant field in cancer research. Although a number of tools have been ...
Chih-Hung Jen, Tsun-Po Yang, Chien-Yi Tung, Shu-Ha...