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BMCBI
2005
163views more  BMCBI 2005»
15 years 1 months ago
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
Background -: Sequencing of EST and BAC end datasets is no longer limited to large research groups. Drops in per-base pricing have made high throughput sequencing accessible to in...
Stephen E. Diener, Thomas D. Houfek, Sam E. Kalat,...
MSS
1999
IEEE
111views Hardware» more  MSS 1999»
15 years 6 months ago
Massive-Scale Data Management using Standards-Based Solutions
In common with many large institutes, CERN has traditionally developed and maintained its own data management solutions. Recently, a significant change of direction has taken plac...
Jamie Shiers
BMCBI
2010
145views more  BMCBI 2010»
15 years 2 months ago
JCoDA: a tool for detecting evolutionary selection
Background: The incorporation of annotated sequence information from multiple related species in commonly used databases (Ensembl, Flybase, Saccharomyces Genome Database, Wormbase...
Steven N. Steinway, Ruth Dannenfelser, Christopher...
BMCBI
2008
163views more  BMCBI 2008»
15 years 2 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig
GI
2010
Springer
14 years 12 months ago
Semantics and Execution of Domain Specific Models
: paper we present a two-level approach to extend the abstract syntax of models with concrete semantics in order to execute such models. First, a light-weight execution infrastruct...
Christian Motika, Hauke Fuhrmann, Reinhard von Han...