Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
Background: Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks ...
Joshua J. Forman, Paul A. Clemons, Stuart L. Schre...
We derive an upper bound on the average MAP decoding error probability of random linear SW codes for arbitrary correlated stationary memoryless sources defined on Galois fields....
Abstract. Ordering constraints are analogous to instances of the satisfiability problem in conjunctive normalform, but instead of a boolean assignment we consider a linear orderin...
We study a simple Markov chain, known as the Glauber dynamics, for randomly sampling (proper) k-colorings of an input graph G on n vertices with maximum degree ∆ and girth g. We...