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» Randomness and the linear degrees of computability
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BMCBI
2010
124views more  BMCBI 2010»
14 years 12 months ago
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated
Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
BMCBI
2005
120views more  BMCBI 2005»
14 years 11 months ago
SpectralNET - an application for spectral graph analysis and visualization
Background: Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks ...
Joshua J. Forman, Paul A. Clemons, Stuart L. Schre...
DCC
2005
IEEE
15 years 1 months ago
On the Performance of Linear Slepian-Wolf Codes for Correlated Stationary Memoryless Sources
We derive an upper bound on the average MAP decoding error probability of random linear SW codes for arbitrary correlated stationary memoryless sources defined on Galois fields....
Shengtian Yang, Peiliang Qiu
CSR
2009
Springer
15 years 6 months ago
On Random Ordering Constraints
Abstract. Ordering constraints are analogous to instances of the satisfiability problem in conjunctive normalform, but instead of a boolean assignment we consider a linear orderin...
Andreas Goerdt
FOCS
2003
IEEE
15 years 5 months ago
A Non-Markovian Coupling for Randomly Sampling Colorings
We study a simple Markov chain, known as the Glauber dynamics, for randomly sampling (proper) k-colorings of an input graph G on n vertices with maximum degree ∆ and girth g. We...
Thomas P. Hayes, Eric Vigoda