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BMCBI
2007
233views more  BMCBI 2007»
14 years 9 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
HCI
2009
14 years 7 months ago
Acquiring a Physical World and Serving Its Mirror World Simultaneously
A mirror world, which is a virtual space modeling a physical space, attracts enormous interests from VR community recently. Various applications such as Second Life, Google Earth a...
Sengpyo Hong, Jong-gil Ahn, Heedong Ko, Jinwook Ki...
GECCO
1999
Springer
111views Optimization» more  GECCO 1999»
15 years 1 months ago
Evolving a behavior-based control architecture- From simulations to the real world
Genetic programming makes it possible to automatically search the space of possible programs. First we evolved a behavior-based control architecture using computer simulations. Th...
Marc Ebner, Andreas Zell
EVOW
2012
Springer
13 years 5 months ago
Hyperparameter Tuning in Bandit-Based Adaptive Operator Selection
We are using bandit-based adaptive operator selection while autotuning parallel computer programs. The autotuning, which uses evolutionary algorithm-based stochastic sampling, take...
Maciej Pacula, Jason Ansel, Saman P. Amarasinghe, ...
IPPS
2007
IEEE
15 years 4 months ago
Formal Analysis for Debugging and Performance Optimization of MPI
High-end computing is universally recognized to be a strategic tool for leadership in science and technology. A significant portion of high-end computing is conducted on clusters...
Ganesh Gopalakrishnan, Robert M. Kirby