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    BMCBI
    2007
    134views more  BMCBI 2007»
    A framework for significance analysis of gene expression data using dimension reduction methods
    14 years 9 months ago
    A framework for significance analysis of gene expression data using dimension reduction methods
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    Background: The most popular methods for significance analysis on microarray data are well suited to find genes differentially expressed across predefined categories. However, ide...
    Lars Halvor Gidskehaug, Endre Anderssen, Arnar Fla...
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    BMCBI
    2008
    102views more  BMCBI 2008»
    PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
    14 years 9 months ago
    PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
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    Background: Phylogenies, i.e., the evolutionary histories of groups of taxa, play a major role in representing the interrelationships among biological entities. Many software tool...
    Cuong Than, Derek A. Ruths, Luay Nakhleh
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    BMCBI
    2008
    166views more  BMCBI 2008»
    Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
    14 years 9 months ago
    Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
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    Background: Probability based statistical learning methods such as mutual information and Bayesian networks have emerged as a major category of tools for reverse engineering mecha...
    Weijun Luo, Kurt D. Hankenson, Peter J. Woolf
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    BMCBI
    2008
    136views more  BMCBI 2008»
    An efficient method for the prediction of deleterious multiple-point mutations in the secondary structure of RNAs using suboptim
    14 years 9 months ago
    An efficient method for the prediction of deleterious multiple-point mutations in the secondary structure of RNAs using suboptim
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    Background: RNAmute is an interactive Java application which, given an RNA sequence, calculates the secondary structure of all single point mutations and organizes them into categ...
    Alexander Churkin, Danny Barash
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    BMCBI
    2008
    119views more  BMCBI 2008»
    Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction
    14 years 9 months ago
    Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction
    Download  www.natlang.hcuge.ch
    Background: This paper describes and evaluates a sentence selection engine that extracts a GeneRiF (Gene Reference into Functions) as defined in ENTREZ-Gene based on a MEDLINE rec...
    Julien Gobeill, Imad Tbahriti, Frédé...
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