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BMCBI
2010
172views more  BMCBI 2010»
15 years 6 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
BMCBI
2007
95views more  BMCBI 2007»
15 years 6 months ago
ZPS: visualization of recent adaptive evolution of proteins
Background: Detection of adaptive amino acid changes in proteins under recent short-term selection is of great interest for researchers studying microevolutionary processes in mic...
Sujay Chattopadhyay, Daniel E. Dykhuizen, Evgeni V...
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ALMOB
2006
113views more  ALMOB 2006»
15 years 6 months ago
Inverse bifurcation analysis: application to simple gene systems
Background: Bifurcation analysis has proven to be a powerful method for understanding the qualitative behavior of gene regulatory networks. In addition to the more traditional for...
James Lu, Heinz W. Engl, Peter Schuster
SIAMSC
2008
131views more  SIAMSC 2008»
15 years 6 months ago
Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
Many important physiological processes operate at time and space scales far beyond those accessible to atom-realistic simulations, and yet discrete stochastic rather than continuum...
Rex A. Kerr, Thomas M. Bartol, Boris Kaminsky, Mar...
TIT
2008
141views more  TIT 2008»
15 years 6 months ago
Dimensionality Reduction for Distributed Estimation in the Infinite Dimensional Regime
Distributed estimation of an unknown signal is a common task in sensor networks. The scenario usually envisioned consists of several nodes, each making an observation correlated wi...
Olivier Roy, Martin Vetterli