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» SEGS: Search for enriched gene sets in microarray data
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BMCBI
2005
103views more  BMCBI 2005»
14 years 9 months ago
Many accurate small-discriminatory feature subsets exist in microarray transcript data: biomarker discovery
Background: Molecular profiling generates abundance measurements for thousands of gene transcripts in biological samples such as normal and tumor tissues (data points). Given such...
Leslie Grate
BIRD
2008
Springer
110views Bioinformatics» more  BIRD 2008»
14 years 11 months ago
SVM-Based Local Search for Gene Selection and Classification of Microarray Data
Abstract. This paper presents a SVM-based local search (SVM-LS) approach to the problem of gene selection and classification of microarray data. The proposed approach is highlighte...
Jose Crispin Hernandez Hernandez, Béatrice ...
BMCBI
2010
151views more  BMCBI 2010»
14 years 9 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
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ICCS
2009
Springer
14 years 7 months ago
Gene Specific Co-regulation Discovery: An Improved Approach
Abstract. Discovering gene co-regulatory relationships is a new but important research problem in DNA microarray data analysis. The problem of gene specific co-regulation discovery...
Ji Zhang, Qing Liu, Kai Xu 0003
BMCBI
2006
183views more  BMCBI 2006»
14 years 9 months ago
Mining gene expression data by interpreting principal components
Background: There are many methods for analyzing microarray data that group together genes having similar patterns of expression over all conditions tested. However, in many insta...
Joseph C. Roden, Brandon W. King, Diane Trout, Ali...