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» SEGS: Search for enriched gene sets in microarray data
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BMCBI
2010
118views more  BMCBI 2010»
14 years 9 months ago
Testing for mean and correlation changes in microarray experiments: an application for pathway analysis
Background: Microarray experiments examine the change in transcript levels of tens of thousands of genes simultaneously. To derive meaningful data, biologists investigate the resp...
Mayer Alvo, Zhongzhu Liu, Andrew Williams, Carole ...
GECCO
2007
Springer
162views Optimization» more  GECCO 2007»
15 years 3 months ago
A multi-objective approach to discover biclusters in microarray data
The main motivation for using a multi–objective evolutionary algorithm for finding biclusters in gene expression data is motivated by the fact that when looking for biclusters ...
Federico Divina, Jesús S. Aguilar-Ruiz
BMCBI
2008
167views more  BMCBI 2008»
14 years 9 months ago
Expression profiles of switch-like genes accurately classify tissue and infectious disease phenotypes in model-based classificat
Background: Large-scale compilation of gene expression microarray datasets across diverse biological phenotypes provided a means of gathering a priori knowledge in the form of ide...
Michael Gormley, Aydin Tozeren
CIKM
2006
Springer
15 years 1 months ago
Mining coherent patterns from heterogeneous microarray data
Microarray technology is a powerful tool for geneticists to monitor interactions among tens of thousands of genes simultaneously. There has been extensive research on coherent sub...
Xiang Zhang, Wei Wang 0010
ISCI
2008
102views more  ISCI 2008»
14 years 9 months ago
Random walk biclustering for microarray data
A biclustering algorithm, based on a greedy technique and enriched with a local search strategy to escape poor local minima, is proposed. The algorithm starts with an initial rand...
Fabrizio Angiulli, Eugenio Cesario, Clara Pizzuti