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BMCBI
2007
166views more  BMCBI 2007»
15 years 3 months ago
Data handling strategies for high throughput pyrosequencers
Background: New high throughput pyrosequencers such as the 454 Life Sciences GS 20 are capable of massively parallelizing DNA sequencing providing an unprecedented rate of output ...
Gabriele A. Trombetti, Raoul J. P. Bonnal, Ermanno...
ADHOC
2005
143views more  ADHOC 2005»
15 years 3 months ago
Active query forwarding in sensor networks
While sensor networks are going to be deployed in diverse application specific contexts, one unifying view is to treat them essentially as distributed databases. The simplest mech...
Narayanan Sadagopan, Bhaskar Krishnamachari, Ahmed...
IPM
2007
95views more  IPM 2007»
15 years 3 months ago
Using structural contexts to compress semistructured text collections
We describe a compression model for semistructured documents, called Structural Contexts Model (SCM), which takes advantage of the context information usually implicit in the stru...
Joaquín Adiego, Gonzalo Navarro, Pablo de l...
BMCBI
2005
94views more  BMCBI 2005»
15 years 3 months ago
Measuring similarities between transcription factor binding sites
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
144
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BMCBI
2005
105views more  BMCBI 2005»
15 years 3 months ago
SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management
Background: Single nucleotide polymorphisms (SNPs) provide an important tool in pinpointing susceptibility genes for complex diseases and in unveiling human molecular evolution. S...
Lin Wang, Simin Liu, Tianhua Niu, Xin Xu