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» Sequence Complexity for Biological Sequence Analysis
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JSW
2007
126views more  JSW 2007»
14 years 9 months ago
Supporting UML Sequence Diagrams with a Processor Net Approach
— UML sequence diagrams focus on the interaction between different classes. For distributed real time transaction processing it is possible to end up with complex sequence diagra...
Tony Spiteri Staines
BMCBI
2008
204views more  BMCBI 2008»
14 years 10 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
BMCBI
2008
178views more  BMCBI 2008»
14 years 10 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
JPDC
2007
167views more  JPDC 2007»
14 years 9 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
DSMML
2004
Springer
15 years 3 months ago
Multi Channel Sequence Processing
Abstract. This paper summarizes some of the current research challenges arising from multi-channel sequence processing. Indeed, multiple real life applications involve simultaneous...
Samy Bengio, Hervé Bourlard