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» Shape Distributions and Protein Similarity
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CANDC
2006
ACM
14 years 9 months ago
Hydrophobic collapse in (in silico) protein folding
A model of hydrophobic collapse, which is treated as the driving force for protein folding, is presented. This model is the superposition of three models commonly used in protein ...
Michal Brylinski, Leszek Konieczny, Irena Roterman
BIOINFORMATICS
2006
111views more  BIOINFORMATICS 2006»
14 years 9 months ago
Multiple Alignment of protein structures and sequences for VMD
Multiple Alignment is a new interface for performing and analyzing multiple protein structure alignments. It enables viewing levels of sequence and structure similarity on the ali...
John Eargle, Dan Wright, Zaida Luthey-Schulten
BMCBI
2005
114views more  BMCBI 2005»
14 years 9 months ago
Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and stru
Background: Protein kinases are a well defined family of proteins, characterized by the presence of a common kinase catalytic domain and playing a significant role in many importa...
Luciano Milanesi, Mauro Petrillo, Leandra Sepe, An...
SMI
2005
IEEE
106views Image Analysis» more  SMI 2005»
15 years 3 months ago
Shape Complexity Based on Mutual Information
Shape complexity has recently received attention from different fields, such as computer vision and psychology. In this paper, integral geometry and information theory tools are ...
Jaume Rigau, Miquel Feixas, Mateu Sbert
BMCBI
2010
160views more  BMCBI 2010»
14 years 9 months ago
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
Background: Protein-protein interactions play a key role in biological processes of proteins within a cell. Recent high-throughput techniques have generated protein-protein intera...
Young-Rae Cho, Aidong Zhang