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RECOMB
2002
Springer
16 years 5 months ago
From promoter sequence to expression: a probabilistic framework
We present a probabilistic framework that models the process by which transcriptional binding explains the mRNA expression of different genes. Our joint probabilistic model unifie...
Eran Segal, Yoseph Barash, Itamar Simon, Nir Fried...
SIGMOD
2008
ACM
120views Database» more  SIGMOD 2008»
16 years 5 months ago
Muse: a system for understanding and designing mappings
Schema mappings are logical assertions that specify the relationships between a source and a target schema in a declarative way. The specification of such mappings is a fundamenta...
Bogdan Alexe, Laura Chiticariu, Renée J. Mi...
VLDB
2004
ACM
137views Database» more  VLDB 2004»
15 years 10 months ago
Schema-Free XQuery
The widespread adoption of XML holds out the promise that document structure can be exploited to specify precise database queries. However, the user may have only a limited knowle...
Yunyao Li, Cong Yu, H. V. Jagadish
ASWC
2009
Springer
15 years 3 months ago
SHARE: A Semantic Web Query Engine for Bioinformatics
Driven by the goal of automating data analyses in the field of bioinformatics, SHARE (Semantic Health and Research Environment) is a specialized SPARQL engine that resolves queries...
Benjamin P. Vandervalk, E. Luke McCarthy, Mark D. ...
BMCBI
2011
14 years 11 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...