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» Structural Testing with Use Cases
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135
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BMCBI
2008
124views more  BMCBI 2008»
15 years 5 months ago
Alignment of protein structures in the presence of domain motions
Background: Structural alignment is an important step in protein comparison. Well-established methods exist for solving this problem under the assumption that the structures under...
Roberto Mosca, Barbara Brannetti, Thomas R. Schnei...
ALMOB
2006
155views more  ALMOB 2006»
15 years 5 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
BMCBI
2006
116views more  BMCBI 2006»
15 years 5 months ago
Whole genome association mapping by incompatibilities and local perfect phylogenies
Background: With current technology, vast amounts of data can be cheaply and efficiently produced in association studies, and to prevent data analysis to become the bottleneck of ...
Thomas Mailund, Søren Besenbacher, Mikkel H...
140
Voted
AOSD
2006
ACM
15 years 11 months ago
Presenting crosscutting structure with active models
When modifying or debugging a software system, among other tasks, developers must often understand and manipulate source code that crosscuts the system’s structure. These tasks ...
Wesley Coelho, Gail C. Murphy
DCC
2006
IEEE
16 years 4 months ago
Compressed Data Structures: Dictionaries and Data-Aware Measures
Abstract. We propose measures for compressed data structures, in which space usage is measured in a data-aware manner. In particular, we consider the fundamental dictionary problem...
Ankur Gupta, Wing-Kai Hon, Rahul Shah, Jeffrey Sco...