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BMCBI
2004
196views more  BMCBI 2004»
14 years 11 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
BIRD
2008
Springer
177views Bioinformatics» more  BIRD 2008»
15 years 1 months ago
Fast Structured Motif Search in DNA Sequences
We study the problem of structured motif search in DNA sequences. This is a fundamental task in bioinformatics which contributes to better understanding of genome characteristics a...
Mihail Halachev, Nematollaah Shiri
ISAAC
2005
Springer
129views Algorithms» more  ISAAC 2005»
15 years 5 months ago
SkipTree: A Scalable Range-Queryable Distributed Data Structure for Multidimensional Data
This paper presents the SkipTree, a new balanced, distributed data structure for storing data with multidimensional keys in a peer-topeer network. The SkipTree supports range quer...
Saeed Alaei, Mohammad Toossi, Mohammad Ghodsi
GD
2004
Springer
15 years 5 months ago
Visualisation of Large and Complex Networks Using PolyPlane
This paper discusses a new method for visualisation of large and complex networks in three dimensions. In particular, we focus on visualising the core tree structure of the large a...
Seok-Hee Hong, Tom Murtagh
GLOBECOM
2009
IEEE
15 years 3 months ago
Stochastic Resource Allocation over Fading Multiple Access and Broadcast Channels
In this paper, we consider the optimal rate and power allocation that maximizes a general utility function of average user rates in a fading multiple-access or broadcast channel. B...
Na Gao, Xin Wang