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BMCBI
2007
182views more  BMCBI 2007»
14 years 12 months ago
Hybrid elementary flux analysis/nonparametric modeling: application for bioprocess control
Background: The progress in the "-omic" sciences has allowed a deeper knowledge on many biological systems with industrial interest. This knowledge is still rarely used ...
Ana P. Teixeira, Carlos Alves, Paula M. Alves, Man...
BMCBI
2010
126views more  BMCBI 2010»
14 years 12 months ago
Simulation of a Petri net-based Model of the Terpenoid Biosynthesis Pathway
Background: The development and simulation of dynamic models of terpenoid biosynthesis has yielded a systems perspective that provides new insights into how the structure of this ...
Aliah Hazmah Hawari, Zeti-Azura Mohamed-Hussein
KDD
2004
ACM
163views Data Mining» more  KDD 2004»
16 years 6 days ago
Exploiting dictionaries in named entity extraction: combining semi-Markov extraction processes and data integration methods
We consider the problem of improving named entity recognition (NER) systems by using external dictionaries--more specifically, the problem of extending state-of-the-art NER system...
William W. Cohen, Sunita Sarawagi
BMCBI
2008
166views more  BMCBI 2008»
14 years 12 months ago
Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
Background: Probability based statistical learning methods such as mutual information and Bayesian networks have emerged as a major category of tools for reverse engineering mecha...
Weijun Luo, Kurt D. Hankenson, Peter J. Woolf
BMCBI
2006
175views more  BMCBI 2006»
14 years 12 months ago
Parameter estimation for stiff equations of biosystems using radial basis function networks
Background: The modeling of dynamic systems requires estimating kinetic parameters from experimentally measured time-courses. Conventional global optimization methods used for par...
Yoshiya Matsubara, Shinichi Kikuchi, Masahiro Sugi...