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NIPS
2004
14 years 11 months ago
Supervised Graph Inference
We formulate the problem of graph inference where part of the graph is known as a supervised learning problem, and propose an algorithm to solve it. The method involves the learni...
Jean-Philippe Vert, Yoshihiro Yamanishi
CANDC
2005
ACM
14 years 9 months ago
Haplotype assembly from aligned weighted SNP fragments
Given an assembled genome of a diploid organism the haplotype assembly problem can be formulated as retrieval of a pair of haplotypes from a set of aligned weighted SNP fragments....
Yu-Ying Zhao, Ling-Yun Wu, Ji-Hong Zhang, Rui-Shen...
BIOINFORMATICS
2004
59views more  BIOINFORMATICS 2004»
14 years 9 months ago
Efficient selection of unique and popular oligos for large EST databases
EST databases have grown exponentially in recent years and now represent the largest collection of genetic sequences. An important application of these databases is that they conta...
Jie Zheng, Timothy J. Close, Tao Jiang, Stefano Lo...
ICFCA
2004
Springer
15 years 3 months ago
BLID: An Application of Logical Information Systems to Bioinformatics
BLID (Bio-Logical Intelligent Database) is a bioinformatic system designed to help biologists extract new knowledge from raw genome data by providing high-level facilities for both...
Sébastien Ferré, Ross D. King
CANDC
2004
ACM
14 years 9 months ago
The difficult interpretation of transcriptome data: the case of the GATC regulatory network
Genomic analyses on part of Escherichia coli's chromosome had suggested the existence of a GATC regulated network. This has recently been confirmed through a transcriptome an...
Alessandra Riva, Marie-Odile Delorme, Tony Chevali...