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101
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EUROPAR
2010
Springer
15 years 1 months ago
Multithreaded Geant4: Semi-automatic Transformation into Scalable Thread-Parallel Software
This work presents an application case study. Geant4 is a 750,000 line toolkit first designed in the mid-1990s and originally intended only for sequential computation. Intel's...
Xin Dong 0004, Gene Cooperman, John Apostolakis
108
Voted
BMCBI
2008
57views more  BMCBI 2008»
15 years 27 days ago
A novel method for high accuracy sumoylation site prediction from protein sequences
Background: Protein sumoylation is an essential dynamic, reversible post translational modification that plays a role in dozens of cellular activities, especially the regulation o...
Jialin Xu, Yun He, Boqin Qiang, Jiangang Yuan, Xia...
94
Voted
BMCBI
2006
97views more  BMCBI 2006»
15 years 25 days ago
PDA: Pooled DNA analyzer
Background: Association mapping using abundant single nucleotide polymorphisms is a powerful tool for identifying disease susceptibility genes for complex traits and exploring pos...
Hsin-Chou Yang, Chia-Ching Pan, Chin-Yu Lin, Cathy...
109
Voted
CORR
2007
Springer
128views Education» more  CORR 2007»
15 years 23 days ago
Model Selection Through Sparse Maximum Likelihood Estimation
We consider the problem of estimating the parameters of a Gaussian or binary distribution in such a way that the resulting undirected graphical model is sparse. Our approach is to...
Onureena Banerjee, Laurent El Ghaoui, Alexandre d'...
99
Voted
BMCBI
2004
81views more  BMCBI 2004»
15 years 20 days ago
Few amino acid positions in rpoB are associated with most of the rifampin resistance in Mycobacterium tuberculosis
Background: Mutations in rpoB, the gene encoding the subunit of DNA-dependent RNA polymerase, are associated with rifampin resistance in Mycobacterium tuberculosis. Several studi...
Michael P. Cummings, Mark R. Segal