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CIKM
2008
Springer
15 years 1 months ago
A consensus based approach to constrained clustering of software requirements
Managing large-scale software projects involves a number of activities such as viewpoint extraction, feature detection, and requirements management, all of which require a human a...
Chuan Duan, Jane Cleland-Huang, Bamshad Mobasher
BMCBI
2010
138views more  BMCBI 2010»
14 years 12 months ago
Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model
Background: While most multiple sequence alignment programs expect that all or most of their input is known to be homologous, and penalise insertions and deletions, this is not a ...
Gayathri Jayaraman, Rahul Siddharthan
ALGORITHMICA
2006
139views more  ALGORITHMICA 2006»
14 years 11 months ago
CONQUEST: A Coarse-Grained Algorithm for Constructing Summaries of Distributed Discrete Datasets
Abstract. In this paper we present a coarse-grained parallel algorithm, CONQUEST, for constructing boundederror summaries of high-dimensional binary attributed data in a distribute...
Jie Chi, Mehmet Koyutürk, Ananth Grama
BMCBI
2006
87views more  BMCBI 2006»
14 years 11 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
CORR
2006
Springer
125views Education» more  CORR 2006»
14 years 11 months ago
Barriers and local minima in energy landscapes of stochastic local search
: A local search algorithm operating on an instance of a Boolean constraint satisfaction problem (in particular, k-SAT) can be viewed as a stochastic process traversing successive ...
Petteri Kaski