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NIPS
2000
15 years 6 months ago
Generalized Belief Propagation
In an important recent paper, Yedidia, Freeman, and Weiss [11] showed that there is a close connection between the belief propagation algorithm for probabilistic inference and the...
Jonathan S. Yedidia, William T. Freeman, Yair Weis...
ALMOB
2006
109views more  ALMOB 2006»
15 years 4 months ago
A novel functional module detection algorithm for protein-protein interaction networks
Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
BMCBI
2006
118views more  BMCBI 2006»
15 years 4 months ago
Low degree metabolites explain essential reactions and enhance modularity in biological networks
Background: Recently there has been a lot of interest in identifying modules at the level of genetic and metabolic networks of organisms, as well as in identifying single genes an...
Areejit Samal, Shalini Singh, Varun Giri, Sandeep ...
BMCBI
2007
93views more  BMCBI 2007»
15 years 4 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
ORDER
2008
100views more  ORDER 2008»
15 years 4 months ago
Orthogonal Surfaces and Their CP-Orders
Orthogonal surfaces are nice mathematical objects which have interesting connections to various fields, e.g., integer programming, monomial ideals and order dimension. While orthog...
Stefan Felsner, Sarah Kappes