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» The Protein Data Bank and lessons in data management
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BMCBI
2002
134views more  BMCBI 2002»
14 years 9 months ago
CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes
Background: Improvements in DNA sequencing technology and methodology have led to the rapid expansion of databases comprising DNA sequence, gene and genome data. Lower operational...
Nikhat Zafar, Raja Mazumder, Donald Seto
VLDB
2001
ACM
119views Database» more  VLDB 2001»
15 years 9 months ago
PicoDBMS: Scaling down database techniques for the smartcard
Smartcards are the most secure portable computing device today. They have been used successfully in applications involving money, proprietary and personal data (such as banking, h...
Philippe Pucheral, Luc Bouganim, Patrick Valduriez...
BMCBI
2011
14 years 4 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...
KDD
2004
ACM
137views Data Mining» more  KDD 2004»
15 years 2 months ago
Mining scale-free networks using geodesic clustering
Many real-world graphs have been shown to be scale-free— vertex degrees follow power law distributions, vertices tend to cluster, and the average length of all shortest paths is...
Andrew Y. Wu, Michael Garland, Jiawei Han
DEBU
2007
141views more  DEBU 2007»
14 years 9 months ago
Issues in Building Practical Provenance Systems
The importance of maintaining provenance has been widely recognized, particularly with respect to highly-manipulated data. However, there are few deployed databases that provide p...
Adriane Chapman, H. V. Jagadish