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ALMOB
2006
89views more  ALMOB 2006»
14 years 12 months ago
On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the ...
Katharina Anna Lehmann, Michael Kaufmann, Stephan ...
PVLDB
2011
14 years 2 months ago
An Incremental Hausdorff Distance Calculation Algorithm
The Hausdorff distance is commonly used as a similarity measure between two point sets. Using this measure, a set X is considered similar to Y iff every point in X is close to at ...
Sarana Nutanong, Edwin H. Jacox, Hanan Samet
RECOMB
2006
Springer
16 years 5 days ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
EWSN
2004
Springer
15 years 5 months ago
Networked Slepian-Wolf: Theory and Algorithms
Abstract. In this paper, we consider the minimization of a relevant energy consumption related cost function in the context of sensor networks where correlated sources are generate...
Razvan Cristescu, Baltasar Beferull-Lozano, Martin...
ASPDAC
2007
ACM
100views Hardware» more  ASPDAC 2007»
15 years 3 months ago
Micro-architecture Pipelining Optimization with Throughput-Aware Floorplanning
- For modern processor designs in nanometer technologies, both block and interconnect pipelining are needed to achieve multi-gigahertz clock frequency, but previous approaches cons...
Yuchun Ma, Zhuoyuan Li, Jason Cong, Xianlong Hong,...