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ALMOB
2006
89views more  ALMOB 2006»
14 years 10 months ago
On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the ...
Katharina Anna Lehmann, Michael Kaufmann, Stephan ...
PVLDB
2011
14 years 25 days ago
An Incremental Hausdorff Distance Calculation Algorithm
The Hausdorff distance is commonly used as a similarity measure between two point sets. Using this measure, a set X is considered similar to Y iff every point in X is close to at ...
Sarana Nutanong, Edwin H. Jacox, Hanan Samet
RECOMB
2006
Springer
15 years 10 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
EWSN
2004
Springer
15 years 3 months ago
Networked Slepian-Wolf: Theory and Algorithms
Abstract. In this paper, we consider the minimization of a relevant energy consumption related cost function in the context of sensor networks where correlated sources are generate...
Razvan Cristescu, Baltasar Beferull-Lozano, Martin...
ASPDAC
2007
ACM
100views Hardware» more  ASPDAC 2007»
15 years 2 months ago
Micro-architecture Pipelining Optimization with Throughput-Aware Floorplanning
- For modern processor designs in nanometer technologies, both block and interconnect pipelining are needed to achieve multi-gigahertz clock frequency, but previous approaches cons...
Yuchun Ma, Zhuoyuan Li, Jason Cong, Xianlong Hong,...