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» Time Series Analysis of Gene Expression and Location Data
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BMCBI
2006
123views more  BMCBI 2006»
14 years 9 months ago
How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different result
Background: Short oligonucleotide arrays for transcript profiling have been available for several years. Generally, raw data from these arrays are analysed with the aid of the Mic...
Frank F. Millenaar, John Okyere, Sean T. May, Mart...
KDD
1997
ACM
213views Data Mining» more  KDD 1997»
15 years 1 months ago
A Probabilistic Approach to Fast Pattern Matching in Time Series Databases
Theproblemof efficiently and accurately locating patterns of interest in massivetimeseries data sets is an important and non-trivial problemin a wide variety of applications, incl...
Eamonn J. Keogh, Padhraic Smyth
BIODATAMINING
2008
178views more  BIODATAMINING 2008»
14 years 9 months ago
Clustering-based approaches to SAGE data mining
Serial analysis of gene expression (SAGE) is one of the most powerful tools for global gene expression profiling. It has led to several biological discoveries and biomedical appli...
Haiying Wang, Huiru Zheng, Francisco Azuaje
ICIC
2009
Springer
14 years 7 months ago
Inference of Differential Equation Models by Multi Expression Programming for Gene Regulatory Networks
This paper presents an evolutionary method for identifying the gene regulatory network from the observed time series data of gene expression using a system of ordinary differential...
Bin Yang, Yuehui Chen, Qingfang Meng
BMCBI
2007
130views more  BMCBI 2007»
14 years 9 months ago
A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...