Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
High performance general-purpose processors are increasingly being used for a variety of application domains scienti c, engineering, databases, and more recently, media processing...
Parthasarathy Ranganathan, Sarita V. Adve, Norman ...
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Abstract. SKaMPI is a benchmark for MPI implementations. Its purpose is the detailed analysis of the runtime of individual MPI operations and comparison of these for di erent imple...
Ralf Reussner, Peter Sanders, Lutz Prechelt, Matth...