This paper studies the input design problem for system identification where time domain constraints have to be considered. A finite Markov chain is used to model the input of the s...
We investigate a family of inference problems on Markov models, where many sample paths are drawn from a Markov chain and partial information is revealed to an observer who attemp...
Daniel Sheldon, M. A. Saleh Elmohamed, Dexter Koze...
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
Many of the same modeling methods used in natural languages, speci cally Markov models and HMM's, have also been applied to biological sequence analysis. In recent years, nat...
Many problems in areas such as Natural Language Processing, Information Retrieval, or Bioinformatic involve the generic task of sequence labeling. In many cases, the aim is to assi...