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BMCBI
2010
125views more  BMCBI 2010»
14 years 10 months ago
Large-scale prediction of protein-protein interactions from structures
Background: The prediction of protein-protein interactions is an important step toward the elucidation of protein functions and the understanding of the molecular mechanisms insid...
Martial Hue, Michael Riffle, Jean-Philippe Vert, W...
BMCBI
2008
145views more  BMCBI 2008»
14 years 10 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
IPM
2008
159views more  IPM 2008»
14 years 10 months ago
Exploring syntactic structured features over parse trees for relation extraction using kernel methods
Extracting semantic relationships between entities from text documents is challenging in information extraction and important for deep information processing and management. This ...
Min Zhang, Guodong Zhou, AiTi Aw
BMCBI
2006
172views more  BMCBI 2006»
14 years 10 months ago
Prediction of cis/trans isomerization in proteins using PSI-BLAST profiles and secondary structure information
Background: The majority of peptide bonds in proteins are found to occur in the trans conformation. However, for proline residues, a considerable fraction of Prolyl peptide bonds ...
Jiangning Song, Kevin Burrage, Zheng Yuan, Thomas ...
ICDM
2008
IEEE
136views Data Mining» more  ICDM 2008»
15 years 4 months ago
Generalized Framework for Syntax-Based Relation Mining
Supervised approaches to Data Mining are particularly appealing as they allow for the extraction of complex relations from data objects. In order to facilitate their application i...
Bonaventura Coppola, Alessandro Moschitti, Daniele...