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» Using Bayesian networks to analyze expression data
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CORR
2012
Springer
281views Education» more  CORR 2012»
13 years 5 months ago
Belief Propagation by Message Passing in Junction Trees: Computing Each Message Faster Using GPU Parallelization
Compiling Bayesian networks (BNs) to junction trees and performing belief propagation over them is among the most prominent approaches to computing posteriors in BNs. However, bel...
Lu Zheng, Ole J. Mengshoel, Jike Chong
BMCBI
2010
136views more  BMCBI 2010»
14 years 10 months ago
A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles
Background: Many research results show that the biological systems are composed of functional modules. Members in the same module usually have common functions. This is useful inf...
Chia-Hao Chin, Shu-Hwa Chen, Chin-Wen Ho, Ming-Tat...
GECCO
2005
Springer
180views Optimization» more  GECCO 2005»
15 years 3 months ago
Inference of gene regulatory networks using s-system and differential evolution
In this work we present an improved evolutionary method for inferring S-system model of genetic networks from the time series data of gene expression. We employed Differential Ev...
Nasimul Noman, Hitoshi Iba
BMCBI
2005
153views more  BMCBI 2005»
14 years 10 months ago
Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
Background: Routine application of gene expression microarray technology is rapidly producing large amounts of data that necessitate new approaches of analysis. The analysis of a ...
Giacomo Finocchiaro, Francesco Mancuso, Heiko M&uu...
CEC
2005
IEEE
15 years 3 months ago
Investigating the effect of random noise on the evolution of colour terms
Abstract- The effect of adding noise to an expressioninduction model of language evolution was investigated. The model consisted of a number of artificial people who were able to i...
Mike Dowman