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» Using Partial Reference Alignments to Align Ontologies
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BMCBI
2010
142views more  BMCBI 2010»
14 years 12 months ago
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Background: Likelihood-based phylogenetic inference is generally considered to be the most reliable classification method for unknown sequences. However, traditional likelihood-ba...
Frederick A. Matsen III, Robin B. Kodner, E. Virgi...
BMCBI
2006
121views more  BMCBI 2006»
14 years 12 months ago
Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using
Background: Availability of high-resolution RNA crystal structures for the 30S and 50S ribosomal subunits and the subsequent validation of comparative secondary structure models h...
Yadhu Kumar, Ralf Westram, Peter Kipfer, Harald Me...
ER
2007
Springer
117views Database» more  ER 2007»
15 years 6 months ago
Semantic Interoperability via Category Theory
This paper aims to bring the benefits of the use of Category Theory to the field of Semantic Web, where the coexistence of intrinsically different models of local knowledge mak...
Isabel Cafezeiro, Edward Hermann Haeusler
BMCBI
2011
14 years 3 months ago
Improving pan-genome annotation using whole genome multiple alignment
Background: Rapid annotation and comparisons of genomes from multiple isolates (pan-genomes) is becoming commonplace due to advances in sequencing technology. Genome annotations c...
Samuel V. Angiuoli, Julie C. Dunning Hotopp, Steve...
ICCV
1999
IEEE
16 years 1 months ago
Projective Alignment with Regions
?We have recently proposed an approach to recognition that uses regions to determine the pose of objects while allowing for partial occlusion of the regions. Regions introduce an a...
Ronen Basri, David W. Jacobs