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BMCBI
2008
145views more  BMCBI 2008»
13 years 6 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
BMCBI
2008
100views more  BMCBI 2008»
13 years 6 months ago
PatternLab for proteomics: a tool for differential shotgun proteomics
Background: A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu et al. demonstrated a method to perform...
Paulo C. Carvalho, Juliana S. G. Fischer, Emily I....

Publication
352views
12 years 12 months ago
A Contourlet Transform Feature Extraction Scheme for Ultrasound Thyroid Texture Classification
Ultrasonography is an invaluable and widely used medical imaging tool. Nevertheless, automatic texture analysis on ultrasound images remains a challenging issue. This work presen...
Stamos Katsigiannis, Eystratios G. Keramidas, Dimi...
BMCBI
2006
143views more  BMCBI 2006»
13 years 6 months ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...
BMCBI
2008
100views more  BMCBI 2008»
13 years 6 months ago
Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen p
Background: T-cell epitopes that promiscuously bind to multiple alleles of a human leukocyte antigen (HLA) supertype are prime targets for development of vaccines and immunotherap...
Guanglan Zhang, Asif M. Khan, Kellathur N. Sriniva...