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» Using a Coding Standard to Improve Program Quality
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110
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IPPS
2007
IEEE
15 years 9 months ago
An Optimizing Compiler for Parallel Chemistry Simulations
Well designed domain specific languages enable the easy expression of problems, the application of domain specific optimizations, and dramatic improvements in productivity for t...
Jun Cao, Ayush Goyal, Samuel P. Midkiff, James M. ...
121
Voted
USENIX
2007
15 years 5 months ago
Dynamic Spyware Analysis
Spyware is a class of malicious code that is surreptitiously installed on victims’ machines. Once active, it silently monitors the behavior of users, records their web surfing ...
Manuel Egele, Christopher Kruegel, Engin Kirda, He...
170
Voted
FPL
2006
Springer
242views Hardware» more  FPL 2006»
15 years 6 months ago
TMD-MPI: An MPI Implementation for Multiple Processors Across Multiple FPGAs
With current FPGAs, designers can now instantiate several embedded processors, memory units, and a wide variety of IP blocks to build a single-chip, high-performance multiprocesso...
Manuel Saldaña, Paul Chow
122
Voted
BMCBI
2010
116views more  BMCBI 2010»
15 years 2 months ago
A hybrid approach to protein folding problem integrating constraint programming with local search
Background: The protein folding problem remains one of the most challenging open problems in computational biology. Simplified models in terms of lattice structure and energy func...
Abu Zafer M. Dayem Ullah, Kathleen Steinhöfel
139
Voted
BIBE
2006
IEEE
119views Bioinformatics» more  BIBE 2006»
15 years 8 months ago
Large Grain Size Stochastic Optimization Alignment
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
Perry Ridge, Hyrum Carroll, Dan Sneddon, Mark J. C...