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» Visual Modeling for Complex Agent-Based Simulation Systems
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BIBM
2007
IEEE
144views Bioinformatics» more  BIBM 2007»
16 years 20 days ago
Kinetic Modeling Using BioPAX Ontology
Thousands of biochemical interactions are available for download from curated databases such as Reactome, Pathway Interaction Database and other sources in the Biological Pathways...
Oliver Ruebenacker, Ion I. Moraru, James C. Schaff...
PPOPP
2006
ACM
16 years 8 days ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...
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HCI
2009
15 years 4 months ago
A Computational Implementation of a Human Attention Guiding Mechanism in MIDAS v5
In complex human-machine systems, the human operator is often required to intervene to detect and solve problems. Given this increased reliance on the human in these critical human...
Brian F. Gore, Becky L. Hooey, Christopher D. Wick...
ASIAMS
2007
IEEE
16 years 20 days ago
On Syntactic Composability and Model Reuse
Composability, the capability to select and assemble offthe-shelf model components in various combinations to satisfy user requirements, is an appealing approach in reducing the t...
Claudia Szabo, Yong Meng Teo
VISSYM
2007
15 years 8 months ago
A Tri-Space Visualization Interface for Analyzing Time-Varying Multivariate Volume Data
The dataset generated by a large-scale numerical simulation may include thousands of timesteps and hundreds of variables describing different aspects of the modeled physical pheno...
Hiroshi Akiba, Kwan-Liu Ma