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120
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BMCBI
2005
114views more  BMCBI 2005»
15 years 18 days ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
86
Voted
ISPASS
2007
IEEE
15 years 7 months ago
Cross Binary Simulation Points
Architectures are usually compared by running the same workload on each architecture and comparing performance. When a single compiled binary of a program is executed on many diff...
Erez Perelman, Jeremy Lau, Harish Patil, Aamer Jal...
105
Voted
BMCBI
2010
150views more  BMCBI 2010»
15 years 25 days ago
Evolutionary rates at codon sites may be used to align sequences and infer protein domain function
Background: Sequence alignments form part of many investigations in molecular biology, including the determination of phylogenetic relationships, the prediction of protein structu...
Pierre M. Durand, Scott Hazelhurst, Theresa L. Coe...
ICCV
2009
IEEE
16 years 5 months ago
Unlabeled data improves word prediction
Labeling image collections is a tedious task, especially when multiple labels have to be chosen for each image. In this paper we introduce a new framework that extends state of ...
Nicolas Loeff, Ali Farhadi, Ian Endres and David A...
93
Voted
CVPR
2005
IEEE
16 years 2 months ago
Energy Minimization via Graph Cuts: Settling What is Possible
The recent explosion of interest in graph cut methods in computer vision naturally spawns the question: what energy functions can be minimized via graph cuts? This question was fi...
Daniel Freedman, Petros Drineas