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BIBM
2008
IEEE
170views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm
— Protein sequence motifs information is crucial to the analysis of biologically significant regions. The conserved regions have the potential to determine the role of the protei...
Bernard Chen, Jieyue He, Stephen Pellicer, Yi Pan
BIRD
2008
Springer
123views Bioinformatics» more  BIRD 2008»
15 years 1 months ago
E-BioFlow: Different Perspectives on Scientific Workflows
We introduce a new type of workflow design system called e-BioFlow and illustrate it by means of a simple sequence alignment workflow. E-BioFlow, intended to model advanced scienti...
Ingo H. C. Wassink, Han Rauwerda, Paul E. van der ...
ICML
2008
IEEE
16 years 19 days ago
Localized multiple kernel learning
Recently, instead of selecting a single kernel, multiple kernel learning (MKL) has been proposed which uses a convex combination of kernels, where the weight of each kernel is opt...
Ethem Alpaydin, Mehmet Gönen
BIBM
2008
IEEE
108views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Systematic Evaluation of Scaling Methods for Gene Expression Data
Even after an experimentally prepared gene expression data set has been pre-processed to account for variations in the microarray technology, there may be inconsistencies between ...
Gaurav Pandey, Lakshmi Naarayanan Ramakrishnan, Mi...
KRMED
2004
15 years 1 months ago
Axioms for parthood and containment relations in bio-ontologies
To fix the semantics of different kinds of parthood relations we require axioms which go beyond those characterizing partial orderings. I formulate such axioms and show their impl...
Thomas Bittner