186 search results - page 1 / 38 » A new approach to fragment assembly in DNA sequencing |
RECOMB
2001
Springer
14 years 5 months ago
2001
Springer
For the last twenty years fragment assembly in DNA sequencing followed the "overlap - layout - consensus" paradigm that is used in all currently available assembly tools...
CSB
2005
IEEE
13 years 6 months ago
2005
IEEE
Genome sequencing opened a new era in genetics allowing the study of genomes at the nucleotide level. However, the chosen method of sequencing produced large numbers of nucleotide...
METMBS
2004
13 years 6 months ago
2004
As more research centers embark on sequencing new genomes, the problem of DNA fragment assembly for shotgun sequencing is growing in importance and complexity. Accurate and fast a...
ISMB
1997
13 years 6 months ago
1997
We present a new method for determining the consensus sequence in DNA fragment assemblies. The new method, Trace-Evidence, directly incorporates aligned ABI trace information into...
CAINE
2008
13 years 6 months ago
2008
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...