BIBM
2007
IEEE
13 years 11 months ago
2007
IEEE
GENMINER is a smart adaptation of closed itemsets based association rules extraction to genomic data. It takes advantage of the novel NORDI discretization method and of the CLOSE ...
BIBM
2007
IEEE
13 years 11 months ago
2007
IEEE
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
BIBM
2007
IEEE
13 years 11 months ago
2007
IEEE
The amino acid sequence of a protein is the key to understanding its structure and ultimately its function in the cell. This paper addresses the fundamental issue of encoding amin...
BIBM
2007
IEEE
13 years 11 months ago
2007
IEEE
Health care data from patients in the Arizona Health Care Cost Containment System, Arizona’s Medicaid program, provides a unique opportunity to exploit state-of-the-art data pro...
BIBM
2007
IEEE
13 years 11 months ago
2007
IEEE
We analyzed the structural properties and the local surface environment of surface amino acid residues of proteins using a large, non-redundant dataset of 2383 protein chains in d...
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
—Array based Comparative Genomic Hybridization (CGH) is a molecular cytogenetic method for the detection of chromosomal imbalances and it has been extensively used for studying c...
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
Abstract—The discovery of locally and significantly correlated subpatterns within a two-dimensional dataset has recently become quite popular and is amongst others addressed by ...
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
Abstract—Recent improvements in high-throughput genotyping technology make possible genome-wide association studies and status prediction (classification) for common complex dis...
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
We propose a novel compartmentalized method for the assembly of physical maps from fingerprinted clones. Our assembler exploits the presence of genetic markers at the global leve...
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
—Microarray technology has provided an opportunity to simultaneously monitor the expression levels of a large number of genes in response to intentional perturbations. A necessar...