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    ISMB
    1996
    112views Computational Biology» more  ISMB 1996»
    Ontological Foundations for Biology Knowledge Models
    13 years 6 months ago
    Ontological Foundations for Biology Knowledge Models
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    Carole D. Hafner, Natalya Fridman Noy
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    ISMB
    1996
    102views Computational Biology» more  ISMB 1996»
    Gene Prediction by Pattern Recognition and Homology Search
    13 years 6 months ago
    Gene Prediction by Pattern Recognition and Homology Search
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    This paper presents an algorithm for combining pattern recognition-based exon prediction and database homologysearch in gene model construction. Thegoal is to use homologousgeneso...
    Ying Xu, Edward C. Uberbacher
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    ISMB
    1996
    110views Computational Biology» more  ISMB 1996»
    The Megaprior Heuristic for Discovering Protein Sequence Patterns
    13 years 6 months ago
    The Megaprior Heuristic for Discovering Protein Sequence Patterns
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    Several computeralgorithms for discovering patterns in groups of protein sequences are in use that are basedon fitting the parametersof a statistical model to a group of related s...
    Timothy L. Bailey, Michael Gribskov
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    ISMB
    1996
    138views Computational Biology» more  ISMB 1996»
    Discovering Empirically Conserved Amino Acid Substitution Groups in Databases of Protein Families
    13 years 6 months ago
    Discovering Empirically Conserved Amino Acid Substitution Groups in Databases of Protein Families
    Download  www.aaai.org
    Thispaperintroducesa methodfor identifyingempirically conservedaminoacid substitution groups.In contrast with existing approachesthat viewaminoacid substitution as a pairwisepheno...
    Thomas D. Wu, Douglas L. Brutlag
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    ISMB
    1996
    90views Computational Biology» more  ISMB 1996»
    Discovering Patterns and Subfamilies in Biosequences
    13 years 6 months ago
    Discovering Patterns and Subfamilies in Biosequences
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    Weconsider the problemof automaticdiscoveryof patterns and the corresponding subfamilies in a set of biosequences. Thesequences are unaligned and may contain noise of unknownlevel...
    Alvis Brazma, Inge Jonassen, Esko Ukkonen, Jaak Vi...
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    ISMB
    1996
    98views Computational Biology» more  ISMB 1996»
    Improving the Quality of Automatic DNA Sequence Assembly Using Fluorescent Trace-Data Classifications
    13 years 6 months ago
    Improving the Quality of Automatic DNA Sequence Assembly Using Fluorescent Trace-Data Classifications
    Download  ftp.cs.wisc.edu
    Virtually all large-scale sequencing projects use automatic sequence-assembly programs to aid in the determination of DNA sequences. The computer-generated assemblies require subs...
    Carolyn F. Allex, Schuyler F. Baldwin, Jude W. Sha...
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    ISMB
    1997
    114views Computational Biology» more  ISMB 1997»
    Bayesian Adaptive Alignment and Inference
    13 years 6 months ago
    Bayesian Adaptive Alignment and Inference
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    Sequencealignmentwithoutthe specification of gap penaltiesor a scoringmatrixis attainedbyusing Bayesianinferenceanda recursivealgorithm.Thisprocedure’srecursivealgorithmsumsover...
    Jun Zhu, Jun S. Liu, Charles E. Lawrence
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    ISMB
    1997
    109views Computational Biology» more  ISMB 1997»
    Functional Prediction of B. subtilis Genes from Their Regulatory Sequences
    13 years 6 months ago
    Functional Prediction of B. subtilis Genes from Their Regulatory Sequences
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    In bacterial cells, gene expression is regulated by multiple sigma factors, each of which has its promoter specificity, according to their conditions. Thus, if we can discriminate...
    Tetsushi Yada, Yasushi Totoki, Takahiro Ishii, Ken...
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    ISMB
    1997
    112views Computational Biology» more  ISMB 1997»
    Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags
    13 years 6 months ago
    Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags
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    Abstract.) Ying Xu, Richard J. MuraF, and Edward C. Uberbacher Computer Science and Mathematics Division and tLife Sciences Division Computational methods for gene identification ...
    Ying Xu, Richard J. Mural, Edward C. Uberbacher
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    ISMB
    1997
    127views Computational Biology» more  ISMB 1997»
    Better Cutters for Protein Mass Fingerprinting: Preliminary Findings
    13 years 6 months ago
    Better Cutters for Protein Mass Fingerprinting: Preliminary Findings
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    Michael J. Wise, Tim Littlejohn, Ian Humphery-Smit...
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