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    BIOCOMP
    2007
    90views Bioinformatics» more  BIOCOMP 2007»
    Prediction of trans-antisense Transcripts in Arabidopsis thaliana
    13 years 6 months ago
    Prediction of trans-antisense Transcripts in Arabidopsis thaliana
    Download  www.biomedcentral.com
    Background: Natural antisense transcripts (NATs) are coding or non-coding RNAs with sequence complementarity to other transcripts (sense transcripts). These RNAs could potentially...
    Huan Wang, Nam-Hai Chua, Xiu-Jie Wang
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    BIOCOMP
    2007
    102views Bioinformatics» more  BIOCOMP 2007»
    Towards Phylogenomic Reconstruction
    13 years 6 months ago
    Towards Phylogenomic Reconstruction
    Download  research.amnh.org
    Reconstructing phylogenies is one of the primary objectives in evolution studies. Efficient software to reconstruct phylogenies based on isolated genes has existed for decades, ye...
    Le Vinh, Andres Varon, Daniel Janies, Ward Wheeler
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    BIOCOMP
    2007
    111views Bioinformatics» more  BIOCOMP 2007»
    Learning Node Replacement Graph Grammars in Metabolic Pathways
    13 years 6 months ago
    Learning Node Replacement Graph Grammars in Metabolic Pathways
    Download  www.eecs.wsu.edu
    — This paper describes graph-based relational, unsupervised learning algorithm to infer node replacement graph grammar and its application to metabolic pathways. We search for fr...
    Jacek P. Kukluk, Chang Hun You, Lawrence B. Holder...
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    BIOCOMP
    2007
    111views Bioinformatics» more  BIOCOMP 2007»
    A Flexible Algorithm for Pairwise Protein Structure Alignment
    13 years 6 months ago
    A Flexible Algorithm for Pairwise Protein Structure Alignment
    Download  www.cs.uno.edu
    Zhiyu Zhao, Bin Fu
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    BIOCOMP
    2007
    238views Bioinformatics» more  BIOCOMP 2007»
    Aldose Reductase and Nitric Oxide Synthase Role in Diabetic Retinopathy: A Bioinformatics Study
    13 years 6 months ago
    Aldose Reductase and Nitric Oxide Synthase Role in Diabetic Retinopathy: A Bioinformatics Study
    Download  allamapparao.org
    - Diabetic retinopathy is the leading cause of blindness among patients with diabetes mellitus. We investigated the role of several proteins that are likely to be involved in the d...
    Hanuman Thota, Nageswara rao Kunjam, Suresh Babu C...
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    BIOCOMP
    2007
    77views Bioinformatics» more  BIOCOMP 2007»
    Selection of Thermodynamic Models for Combinatorial Control of Multiple Transcription Factors in Early Differentiation of Embryo
    13 years 6 months ago
    Selection of Thermodynamic Models for Combinatorial Control of Multiple Transcription Factors in Early Differentiation of Embryo
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    Chieh-Chun Chen, Xinguang Zhu, Sheng Zhong
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    BIOCOMP
    2007
    122views Bioinformatics» more  BIOCOMP 2007»
    xMAN: extreme MApping of oligoNucleotides
    13 years 6 months ago
    xMAN: extreme MApping of oligoNucleotides
    Download  www.biomedcentral.com
    Background: The ability to rapidly map millions of oligonucleotide fragments to a reference genome is crucial to many high throughput genomic technologies. Results: We propose an ...
    Wei Li, Jason S. Carroll, Myles Brown, X. Shirley ...
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    BIOCOMP
    2007
    126views Bioinformatics» more  BIOCOMP 2007»
    Stability Analysis of Genetic Regulatory Network with Additive Noises
    13 years 6 months ago
    Stability Analysis of Genetic Regulatory Network with Additive Noises
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    Background: Genetic regulatory networks (GRN) can be described by differential equations with SUM logic which has been found in many natural systems. Identification of the network...
    Yufang Jin
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    BIOCOMP
    2007
    142views Bioinformatics» more  BIOCOMP 2007»
    Interaction Models for Biochemical Reactions
    13 years 6 months ago
    Interaction Models for Biochemical Reactions
    Download  pi2.informatik.uni-mannheim.de
    Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
    Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...
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    BIOCOMP
    2007
    98views Bioinformatics» more  BIOCOMP 2007»
    Quality-Based Similarity Search for Biological Sequence Databases
    13 years 6 months ago
    Quality-Based Similarity Search for Biological Sequence Databases
    Download  www.cise.ufl.edu
    Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
    Xuehui Li, Tamer Kahveci
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