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BMCBI
2007
151views more  BMCBI 2007»
14 years 12 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
127
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CASES
2007
ACM
15 years 1 months ago
Facilitating compiler optimizations through the dynamic mapping of alternate register structures
Aggressive compiler optimizations such as software pipelining and loop invariant code motion can significantly improve application performance, but these transformations often re...
Chris Zimmer, Stephen Roderick Hines, Prasad Kulka...
DAC
2005
ACM
16 years 22 days ago
Hardware speech recognition for user interfaces in low cost, low power devices
We propose a system architecture for real-time hardware speech recognition on low-cost, power-constrained devices. The system is intended to support real-time speech-based user in...
Sergiu Nedevschi, Rabin K. Patra, Eric A. Brewer
BMCBI
2005
87views more  BMCBI 2005»
14 years 11 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
CSREAESA
2003
15 years 1 months ago
Worst Case Execution Time Analysis for Petri Net Models of Embedded Systems
We present an approach for Worst-Case Execution Time (WCET) Analysis of embedded system software, that is generated from Petri net specifications. The presented approach is part ...
Friedhelm Stappert, Carsten Rust