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BIRD
2008
Springer
162views Bioinformatics» more  BIRD 2008»
14 years 11 months ago
Suffix Tree Characterization of Maximal Motifs in Biological Sequences
Finding motifs in biological sequences is one of the most intriguing problems for string algorithms designers due to, on the one hand, the numerous applications of this problem in...
Maria Federico, Nadia Pisanti
NIPS
2001
14 years 11 months ago
K-Local Hyperplane and Convex Distance Nearest Neighbor Algorithms
Guided by an initial idea of building a complex (non linear) decision surface with maximal local margin in input space, we give a possible geometrical intuition as to why K-Neares...
Pascal Vincent, Yoshua Bengio
BMCBI
2010
113views more  BMCBI 2010»
14 years 9 months ago
Gene prioritization and clustering by multi-view text mining
Background: Text mining has become a useful tool for biologists trying to understand the genetics of diseases. In particular, it can help identify the most interesting candidate g...
Shi Yu, Léon-Charles Tranchevent, Bart De M...
BMCBI
2010
95views more  BMCBI 2010»
14 years 9 months ago
Quantifying the relationship between sequence and three-dimensional structure conservation in RNA
Background: In recent years, the number of available RNA structures has rapidly grown reflecting the increased interest on RNA biology. Similarly to the studies carried out two de...
Emidio Capriotti, Marc A. Martí-Renom
JACM
2008
91views more  JACM 2008»
14 years 9 months ago
On the minimization of XPath queries
XML queries are usually expressed by means of XPath expressions identifying portions of the selected documents. An XPath expression defines a way of navigating an XML tree and ret...
Sergio Flesca, Filippo Furfaro, Elio Masciari