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POPL
2008
ACM
16 years 4 months ago
From dirt to shovels: fully automatic tool generation from ad hoc data
An ad hoc data source is any semistructured data source for which useful data analysis and transformation tools are not readily available. Such data must be queried, transformed a...
Kathleen Fisher, David Walker, Kenny Qili Zhu, Pet...
142
Voted
RECOMB
2005
Springer
16 years 4 months ago
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
137
Voted
RECOMB
2003
Springer
16 years 4 months ago
Physical network models and multi-source data integration
We develop a new framework for inferring models of transcriptional regulation. The models in this approach, which we call physical models, are constructed on the basis of verifiab...
Chen-Hsiang Yeang, Tommi Jaakkola
122
Voted
RECOMB
2002
Springer
16 years 4 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
VLDB
2001
ACM
127views Database» more  VLDB 2001»
16 years 4 months ago
Efficiently publishing relational data as XML documents
: XML is rapidly emerging as a standard for exchanging business data on the World Wide Web. For the foreseeable future, however, most business data will continue to be stored in re...
Jayavel Shanmugasundaram, Eugene J. Shekita, Rimon...
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