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» In Search of Optimal Codes for DNA Computing
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IPPS
2007
IEEE
15 years 3 months ago
A Grid-enabled Branch and Bound Algorithm for Solving Challenging Combinatorial Optimization Problems
Solving optimally large instances of combinatorial optimization problems requires a huge amount of computational resources. In this paper, we propose an adaptation of the parallel...
Mohand-Said Mezmaz, Nouredine Melab, El-Ghazali Ta...
82
Voted
CORR
2008
Springer
128views Education» more  CORR 2008»
14 years 9 months ago
A Fast Generic Sequence Matching Algorithm
A string matching--and more generally, sequence matching--algorithm is presented that has a linear worst-case computing time bound, a low worst-case bound on the number of compari...
David R. Musser, Gor V. Nishanov
IPPS
2002
IEEE
15 years 2 months ago
Approximate String Matching in LDAP Based on Edit Distance
As the E-Commerce rapidly grows up, searching data is almost necessary in every application. Approximate string matching problems play a very important role to search with errors....
Chi-Chien Pan, Kai-Hsiang Yang, Tzao-Lin Lee
CIBCB
2005
IEEE
15 years 3 months ago
Feedback Memetic Algorithms for Modeling Gene Regulatory Networks
— In this paper we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of memetic algori...
Christian Spieth, Felix Streichert, Jochen Supper,...
92
Voted
IPPS
2007
IEEE
15 years 3 months ago
Experience of Optimizing FFT on Intel Architectures
Automatic library generators, such as ATLAS [11], Spiral [8] and FFTW [2], are promising technologies to generate efficient code for different computer architectures. The library...
Daniel Orozco, Liping Xue, Murat Bolat, Xiaoming L...