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» LeWI: A Runtime Balancing Algorithm for Nested Parallelism
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CF
2007
ACM
15 years 1 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
86
Voted
JASIS
2007
122views more  JASIS 2007»
14 years 9 months ago
Exploiting parallelism to support scalable hierarchical clustering
A distributed memory parallel version of the group average Hierarchical Agglomerative Clustering algorithm is proposed to enable scaling the document clustering problem to large c...
Rebecca Cathey, Eric C. Jensen, Steven M. Beitzel,...
IPPS
2007
IEEE
15 years 3 months ago
A Reconfigurable Load Balancing Architecture for Molecular Dynamics
This paper proposes a novel architecture supporting dynamic load balancing on an FPGA for a Molecular Dynamics algorithm. Load balancing is primarily achieved through the use of s...
Jonathan Phillips, Matthew Areno, Chris Rogers, Ar...
108
Voted
PPOPP
2006
ACM
15 years 3 months ago
McRT-STM: a high performance software transactional memory system for a multi-core runtime
Applications need to become more concurrent to take advantage of the increased computational power provided by chip level multiprocessing. Programmers have traditionally managed t...
Bratin Saha, Ali-Reza Adl-Tabatabai, Richard L. Hu...
SPAA
1998
ACM
15 years 1 months ago
Fast Set Operations Using Treaps
We present parallel algorithms for union, intersection and difference on ordered sets using random balanced binary trees (treaps [26]). For two sets of size n and m (m ≤ n) the...
Guy E. Blelloch, Margaret Reid-Miller