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» On the Complexity of the Interlace Polynomial
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PODS
2009
ACM
136views Database» more  PODS 2009»
16 years 2 months ago
Distributed XML design
A distributed XML document is an XML document that spans several machines or Web repositories. We assume that a distribution design of the document tree is given, providing an XML...
Serge Abiteboul, Georg Gottlob, Marco Manna
KDD
2007
ACM
227views Data Mining» more  KDD 2007»
16 years 2 months ago
Fast best-effort pattern matching in large attributed graphs
We focus on large graphs where nodes have attributes, such as a social network where the nodes are labelled with each person's job title. In such a setting, we want to find s...
Hanghang Tong, Christos Faloutsos, Brian Gallagher...
RECOMB
2006
Springer
16 years 2 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
RECOMB
2005
Springer
16 years 2 months ago
Reconstruction of Reticulate Networks from Gene Trees
Abstract. One of the simplest evolutionary models has molecular sequences evolving from a common ancestor down a bifurcating phylogenetic tree, experiencing point-mutations along t...
Daniel H. Huson, Tobias H. Klöpper, Pete J. L...
167
Voted
STOC
2007
ACM
239views Algorithms» more  STOC 2007»
16 years 2 months ago
Approximating minimum bounded degree spanning trees to within one of optimal
In the MINIMUM BOUNDED DEGREE SPANNING TREE problem, we are given an undirected graph with a degree upper bound Bv on each vertex v, and the task is to find a spanning tree of min...
Mohit Singh, Lap Chi Lau