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RECOMB
2006
Springer
16 years 5 months ago
Predicting Experimental Quantities in Protein Folding Kinetics Using Stochastic Roadmap Simulation
Abstract. This paper presents a new method for studying protein folding kinetics. It uses the recently introduced Stochastic Roadmap Simulation (SRS) method to estimate the transit...
Tsung-Han Chiang, Mehmet Serkan Apaydin, Douglas L...
RECOMB
2004
Springer
16 years 5 months ago
Aligning alignments exactly
d abstract) John Kececioglu and Dean Starrett Department of Computer Science The University of Arizona Tucson AZ 85721, USA A basic computational problem that arises in both the...
John D. Kececioglu, Dean Starrett
STOC
2004
ACM
126views Algorithms» more  STOC 2004»
16 years 5 months ago
Bypassing the embedding: algorithms for low dimensional metrics
The doubling dimension of a metric is the smallest k such that any ball of radius 2r can be covered using 2k balls of raThis concept for abstract metrics has been proposed as a na...
Kunal Talwar
STOC
2001
ACM
151views Algorithms» more  STOC 2001»
16 years 5 months ago
Buffer overflow management in QoS switches
Abstract. We consider two types of buffering policies that are used in network switches supporting Quality of Service (QoS). In the FIFO type, packets must be transmitted in the or...
Alexander Kesselman, Zvi Lotker, Yishay Mansour, B...
ICALP
2009
Springer
16 years 5 months ago
Proportional Response Dynamics in the Fisher Market
Abstract. In this paper, we show that the proportional response dynamics, a utility based distributed dynamics, converges to the market equilibrium in the Fisher market with consta...
Li Zhang