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NAR
2011
305views Computer Vision» more  NAR 2011»
14 years 17 days ago
CDD: a Conserved Domain Database for the functional annotation of proteins
NCBI’s Conserved Domain Database (CDD) is a resource for the annotation of protein sequences with the location of conserved domain footprints, and functional sites inferred from...
Aron Marchler-Bauer, Shennan Lu, John B. Anderson,...
NAR
2011
209views Computer Vision» more  NAR 2011»
14 years 17 days ago
CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowled
During the development of methods for cancer diagnosis and treatment, a vast amount of information is generated. Novel cancer target proteins have been identified and many compoun...
Jessica Ahmed, Thomas Meinel, Mathias Dunkel, Manu...
NAR
2011
188views Computer Vision» more  NAR 2011»
14 years 17 days ago
The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes
Various databases have harnessed the wealth of publicly available microarray data to address biological questions ranging from across-tissue differential expression to homologous ...
Matthew N. McCall, Karan Uppal, Harris A. Jaffee, ...
NAR
2011
158views Computer Vision» more  NAR 2011»
14 years 17 days ago
CPLA 1.0: an integrated database of protein lysine acetylation
Zexian Liu, Jun Cao, Xinjiao Gao, Yanhong Zhou, Lo...
NAR
2011
187views Computer Vision» more  NAR 2011»
14 years 17 days ago
The RNA helicase database
RNA helicases are ubiquitous and essential enzymes that function in nearly all aspects of RNA metabolism. The RNA helicase database (www .rnahelicase.org) integrates the wealth of...
Anja Jankowsky, Ulf-Peter Guenther, Eckhard Jankow...
NAR
2011
223views Computer Vision» more  NAR 2011»
14 years 17 days ago
HitPredict: a database of quality assessed protein-protein interactions in nine species
Despite the availability of a large number of protein– protein interactions (PPIs) in several species, researchers are often limited to using very small subsets in a few organis...
Ashwini Patil, Kenta Nakai, Haruki Nakamura
NAR
2011
159views Computer Vision» more  NAR 2011»
14 years 17 days ago
SuperSweet - a resource on natural and artificial sweetening agents
A vast number of sweet tasting molecules are known, encompassing small compounds, carbohydrates, D-amino acids and large proteins. Carbohydrates play a particularly big role in hu...
Jessica Ahmed, Saskia Preissner, Mathias Dunkel, C...
NAR
2011
214views Computer Vision» more  NAR 2011»
14 years 17 days ago
IEDB-3D: structural data within the immune epitope database
IEDB-3D is the 3D structural component of the Immune Epitope Database (IEDB) available via the ‘Browse by 3D Structure’ page at http://www.iedb .org. IEDB-3D catalogs B- and T...
Julia V. Ponomarenko, Nikitas Papangelopoulos, Dir...
NAR
2011
162views Computer Vision» more  NAR 2011»
14 years 17 days ago
GlycomeDB - a unified database for carbohydrate structures
GlycomeDB integrates the structural and taxonomic data of all major public carbohydrate databases, as well as carbohydrates contained in the Protein Data Bank, which renders the d...
René Ranzinger, Stephan Herget, Claus-Wilhe...