COCOON
2005
Springer
13 years 10 months ago
2005
Springer
Recently, several studies taking into account the ability for a gene to be absent or to have some copies in genomes have been proposed, as the examplar distance [11, 6] or the gene...
CSB
2005
IEEE
13 years 10 months ago
2005
IEEE
Annotation of protein function often arises in the context of partially complete genomes but is not adequately addressed. We present an annotation method by extracting ortholog cl...
CSB
2005
IEEE
13 years 10 months ago
2005
IEEE
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
RECOMB
2007
Springer
13 years 11 months ago
2007
Springer
Abstract. Genome doubling simultaneously doubles all genetic markers. Genome rearrangement phylogenetics requires that all genomes analyzed have the same set of orthologs, so that ...
WABI
2009
Springer
13 years 11 months ago
2009
Springer
Abstract. The existing synteny block reconstruction algorithms use anchors (e.g., orthologous genes) shared over all genomes to construct the synteny blocks for multiple genomes. T...