RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). Detecting this process bears great significanc...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Homology identification is the first step for many genomic studies. Current methods, based on sequence comparison, can result in a substantial number of mis-assignments due to the ...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. Given a phylogenetic tree T for a family of tandemly repeated genes and their signed order O on the chromosome, we aim to find the minimum number of inversions compatible...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Inferring orthologous and paralogous genes is an important problem in whole genomes comparisons, both for functional or evolutionary studies. In this paper, we introduce a new appr...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
Abstract. Preliminary to most comparative genomics studies is the annotation of chromosomes as ordered sequences of genes. Unfortunately, different genetic mapping techniques usual...
RECOMB
2007
Springer
14 years 4 months ago
2007
Springer
RECOMB
2007
Springer
14 years 4 months ago
2007
Springer
RECOMB
2007
Springer
14 years 4 months ago
2007
Springer
RECOMB
2007
Springer
14 years 4 months ago
2007
Springer
Accurately reconstructing the large-scale gene order in an ancestral genome is a critical step to better understand genome evolution. In this paper, we propose a heuristic algorith...