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A complete understanding of transcriptional regulatory processes in the cell requires identiﬁcation of transcription factor binding sites on a genomewide scale. Unfortunately, th...

Leelavati Narlikar, Raluca Gordân, Alexander...

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108

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ISMB
2007

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A Chado case study: an ontology-based modular schema for representing genome-associated biological information

15 years 2 months ago

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Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...

Chris Mungall, David B. Emmert

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CIBCB
2007
IEEE

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Genetic Regulatory Network Modeling Using Network Component Analysis and Fuzzy Clustering

15 years 4 months ago

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Gene regulatory network model is the most widely used mechanism to model and predict the behavior of living organisms. Network Component Analysis (NCA) as an emerging issue for unc...

Fatemeh Bakouie, Mohammad Hassan Moradi

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136

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CIBCB
2007
IEEE

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Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression

15 years 4 months ago

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Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...

Ji He, Xinbin Dai, Xuechun Zhao

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Artificial Intelligence