173
Voted
WABI
15 years 10 months ago
2004 Springer 
Abstract. Haplotype inference problem asks for a set of haplotypes explaining a given set of genotypes. Popular software tools for haplotype inference (e.g., PHASE, HAPLOTYPER) as ...
160
click to vote
WABI
15 years 10 months ago
2004 Springer
Abstract. Sequence alignment algorithms have a long standing tradition in bioinformatics. In this paper, we formulate an extension to existing local alignment algorithms: local ali...
153
click to vote
WABI
2004 Springer Reversing Gene Erosion - Reconstructing Ancestral Bacterial Genomes from Gene-Content and Order Data
15 years 10 months ago
In the last few years, it has become routine to use gene-order data to reconstruct phylogenies, both in terms of edge distances (parsimonious sequences of operations that transform...
149
Voted
WABI
15 years 10 months ago
2004 Springer
Abstract. In this paper we present a more efficient algorithm for comparison of minisatellites which has complexity O(n 3 + m 3 + mn 2 + nm 2 + mn) where n and m are the lengths of...
145
click to vote
WABI
15 years 10 months ago
2004 Springer
Conserved intervals were recently introduced as a measure of similarity between genomes whose genes have been shuffled during evolution by genomic rearrangements. Phylogenetic reco...
|
Bioinformatics