210
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WABI
16 years 8 days ago
2004 Springer 
Abstract. Haplotype inference problem asks for a set of haplotypes explaining a given set of genotypes. Popular software tools for haplotype inference (e.g., PHASE, HAPLOTYPER) as ...
205
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WABI
16 years 8 days ago
2004 Springer
Abstract. Sequence alignment algorithms have a long standing tradition in bioinformatics. In this paper, we formulate an extension to existing local alignment algorithms: local ali...
193
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WABI
2004 Springer Reversing Gene Erosion - Reconstructing Ancestral Bacterial Genomes from Gene-Content and Order Data
16 years 8 days ago
In the last few years, it has become routine to use gene-order data to reconstruct phylogenies, both in terms of edge distances (parsimonious sequences of operations that transform...
179
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WABI
16 years 8 days ago
2004 Springer
Abstract. In this paper we present a more efficient algorithm for comparison of minisatellites which has complexity O(n 3 + m 3 + mn 2 + nm 2 + mn) where n and m are the lengths of...
179
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WABI
16 years 8 days ago
2004 Springer
Abstract. Genomic instabilities, amplifications, deletions and translocations are often observed in tumor cells. In the process of cancer pathogenesis cells acquire multiple genom...
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Bioinformatics