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    CMSB
    2007
    Springer
    183views Applied Computing» more  CMSB 2007»
    Context Sensitivity in Logical Modeling with Time Delays
    15 years 6 months ago
    Context Sensitivity in Logical Modeling with Time Delays
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    For modeling and analyzing regulatory networks based on qualitative information and possibly additional temporal constraints, approaches using hybrid automata can be very helpful. ...
    Heike Siebert, Alexander Bockmayr
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    CMSB
    2007
    Springer
    132views Applied Computing» more  CMSB 2007»
    A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets
    15 years 6 months ago
    A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets
    Download  www.dcs.gla.ac.uk
    We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which unifies the qualitative, stochastic and continuous paradigms. Each per...
    David Gilbert, Monika Heiner, Sebastian Lehrack
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    CMSB
    2007
    Springer
    128views Applied Computing» more  CMSB 2007»
    Reconstructing Metabolic Pathways by Bidirectional Chemical Search
    15 years 6 months ago
    Reconstructing Metabolic Pathways by Bidirectional Chemical Search
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    Abstract. One of the main challenges in systems biology is the establishment of the metabolome: a catalogue of the metabolites and biochemical reactions present in a specific orga...
    Liliana Félix, Francesc Rosselló, Ga...
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    CMSB
    2007
    Springer
    117views Applied Computing» more  CMSB 2007»
    Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks
    15 years 6 months ago
    Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks
    Download  www.nesc.ac.uk
    Aurélien Naldi, Denis Thieffry, Claudine Ch...
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    CMSB
    2007
    Springer
    104views Applied Computing» more  CMSB 2007»
    On the Analysis of Numerical Data Time Series in Temporal Logic
    15 years 6 months ago
    On the Analysis of Numerical Data Time Series in Temporal Logic
    Download  www.nesc.ac.uk
    François Fages, Aurélien Rizk
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