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138
Voted
CPM
2006
Springer
182views Combinatorics» more  CPM 2006»
15 years 6 months ago
Theoretical and Practical Improvements on the RMQ-Problem, with Applications to LCA and LCE
The Range-Minimum-Query-Problem is to preprocess an array such that the position of the minimum element between two specified indices can be obtained efficiently. We present a dire...
Johannes Fischer, Volker Heun
155
Voted
CPM
2006
Springer
176views Combinatorics» more  CPM 2006»
15 years 6 months ago
Longest Common Subsequences in Permutations and Maximum Cliques in Circle Graphs
For two strings a, b, the longest common subsequence (LCS) problem consists in comparing a and b by computing the length of their LCS. In a previous paper, we defined a generalisat...
Alexandre Tiskin
138
Voted
CPM
2006
Springer
175views Combinatorics» more  CPM 2006»
15 years 6 months ago
On-Line Linear-Time Construction of Word Suffix Trees
Abstract. Suffix trees are the key data structure for text string matching, and are used in wide application areas such as bioinformatics and data compression. Sparse suffix trees ...
Shunsuke Inenaga, Masayuki Takeda
125
Voted
CPM
2006
Springer
164views Combinatorics» more  CPM 2006»
15 years 6 months ago
Dynamic Entropy-Compressed Sequences and Full-Text Indexes
Veli Mäkinen, Gonzalo Navarro
133
Voted
CPM
2006
Springer
145views Combinatorics» more  CPM 2006»
15 years 6 months ago
Approximation of RNA Multiple Structural Alignment
Abstract. In the context of non-coding RNA (ncRNA) multiple structural alignment, Davydov and Batzoglou introduced in [7] the problem of finding the largest nested linear graph tha...
Marcin Kubica, Romeo Rizzi, Stéphane Vialet...
Combinatorics
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